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1

Human DHX9 Helicase Unwinds Triple-Helical DNA Structures

Jain, Aklank, Bacolla, Albino, Chakraborty, Prasun, Grosse, Frank, Vasquez, Karen M.

Journal:

Year:

2010

Language:

english

File:

PDF, 4.66 MB

english, 2010

2

Uncovering DNA-PKcs ancient phylogeny, unique sequence motifs and insights for human disease

Lees-Miller, James P., Cobban, Alexander, Katsonis, Panagiotis, Bacolla, Albino, Tsutakawa, Susan E., Hammel, Michal, Meek, Katheryn, Anderson, Dave W., Lichtarge, Olivier, Tainer, John A., Lees-Mille

Journal:

Progress in Biophysics and Molecular Biology

Year:

2020

File:

PDF, 70.03 MB

2020

3

Gene conversion causing human inherited disease: Evidence for involvement of non-B-DNA-forming sequences and recombination-promoting motifs in DNA breakage and repair

Nadia Chuzhanova, Jian-Min Chen, Albino Bacolla, George P. Patrinos, Claude Férec, Robert D. Wells, David N. Cooper

Journal:

Year:

2009

Language:

english

File:

PDF, 208 KB

english, 2009

4

On the sequence-directed nature of human gene mutation: The role of genomic architecture and the local DNA sequence environment in mediating gene mutations underlying human inherited disease

David N. Cooper, Albino Bacolla, Claude Férec, Karen M. Vasquez, Hildegard Kehrer-Sawatzki, Jian-Min Chen

Journal:

Year:

2011

Language:

english

File:

PDF, 643 KB

english, 2011

5

Non-B DNA conformations as determinants of mutagenesis and human disease

Albino Bacolla, Robert D. Wells

Journal:

Molecular Carcinogenesis

Year:

2009

Language:

english

File:

PDF, 207 KB

english, 2009

6

Non-B DNA structure-induced genetic instability and evolution

Junhua Zhao, Albino Bacolla, Guliang Wang, Karen M. Vasquez

Journal:

Cellular and Molecular Life Sciences

Year:

2010

Language:

english

File:

PDF, 647 KB

english, 2010

7

Cruciform-forming inverted repeats appear to have mediated many of the microinversions that distinguish the human and chimpanzee genomes

Jessica Kolb, Nadia A. Chuzhanova, Josef Högel, Karen M. Vasquez, David N. Cooper, Albino Bacolla, Hildegard Kehrer-Sawatzki

Journal:

Chromosome Research

Year:

2009

Language:

english

File:

PDF, 288 KB

english, 2009

8

The involvement of non-B DNA structures in gross chromosomal rearrangements

Albino Bacolla, Marzena Wojciechowska, Beata Kosmider, Jacquelynn E. Larson, Robert D. Wells

Journal:

Year:

2006

Language:

english

File:

PDF, 340 KB

english, 2006

9

Sticky DNA: in Vivo Formation in E. coli and in Vitro Association of Long GAA•TTC Tracts to Generate Two Independent Supercoiled Domains

Leslie S. Son, Albino Bacolla, Robert D. Wells

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 1022 KB

english, 2006

10

Encyclopedia of Life Sciences || Non-B DNA Structure and Mutations Causing Human Genetic Disease

Bacolla, Albino

Year:

2001

Language:

english

File:

PDF, 653 KB

english, 2001

11

Structure, expression and regulation of the thyroglobulin gene

Vassart, Gilbert, Bacolla, Albino, Brocas, Huguette, Christophe, Daniel, de Martynoff, Guy, Leriche, Anne, Mercken, Luc, Parma, Jasmine, Pohl, Viviane, Targovnik, Hector

Journal:

Molecular and Cellular Endocrinology

Year:

1985

Language:

english

File:

PDF, 989 KB

english, 1985

12

DNA structure matters

Albino Bacolla,David N Cooper,Karen M Vasquez

Journal:

Genome Medicine

Year:

2013

Language:

english

File:

PDF, 94 KB

english, 2013

13

The somatic autosomal mutation matrix in cancer genomes

Temiz, Nuri A., Donohue, Duncan E., Bacolla, Albino, Vasquez, Karen M., Cooper, David N., Mudunuri, Uma, Ivanic, Joseph, Cer, Regina Z., Yi, Ming, Stephens, Robert M., Collins, Jack R., Luke, Brian T.

Journal:

Year:

2015

Language:

english

File:

PDF, 543 KB

english, 2015

14

Mung bean nuclease cleavage pattern at a polypurine-polypyrimidine sequence upstream from the mouse metallothionein-I gene

Bacolla, Albino, Wu, Felicia Y.-H.

Journal:

Nucleic Acids Research

Year:

1991

Language:

english

File:

PDF, 1.53 MB

english, 1991

15

Guanine Holes Are Prominent Targets for Mutation in Cancer and Inherited Disease

Bacolla, Albino, Temiz, Nuri A., Yi, Ming, Ivanic, Joseph, Cer, Regina Z., Donohue, Duncan E., Ball, Edward V., Mudunuri, Uma S., Wang, Guliang, Jain, Aklank, Volfovsky, Natalia, Luke, Brian T., Steph

Journal:

Year:

2013

Language:

english

File:

PDF, 640 KB

english, 2013

16

Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes

Lu, Steve, Wang, Guliang, Bacolla, Albino, Zhao, Junhua, Spitser, Scott, Vasquez, Karen M.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.84 MB

english, 2015

17

Erratum to: The somatic autosomal mutation matrix in cancer genomes

Temiz, Nuri A., Donohue, Duncan E., Bacolla, Albino, Vasquez, Karen M., Cooper, David N., Mudunuri, Uma, Ivanic, Joseph, Cer, Regina Z., Yi, Ming, Stephens, Robert M., Collins, Jack R., Luke, Brian T.

Journal:

Year:

2015

Language:

english

File:

PDF, 354 KB

english, 2015

18

Chimeric Human Immunodeficiency Virus Type 1/Type 2 Reverse Transcriptases Display Reversed Sensitivity to Nonnucleoside Analog Inhibitors

Cheng-Kon Shih, Janice M. Rose, Gale L. Hansen, Joe C. Wu, Albino Bacolla and Johanna A. Griffin

Journal:

Proceedings of the National Academy of Sciences

Year:

1991

Language:

english

File:

PDF, 837 KB

english, 1991

19

A Role for Non-B DNA Forming Sequences in Mediating Microlesions Causing Human Inherited Disease

Kamat, Mihir Anant, Bacolla, Albino, Cooper, David N, Chuzhanova, Nadia

Journal:

Year:

2016

Language:

english

File:

PDF, 738 KB

english, 2016

20

Translocation and deletion breakpoints in cancer genomes are associated with potential non-B DNA-forming sequences

Bacolla, Albino, Tainer, John A., Vasquez, Karen M., Cooper, David N.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 5.01 MB

english, 2016

21

Long non-coding RNA: A new paradigm for lung cancer

Khandelwal, Akanksha, Bacolla, Albino, Vasquez, Karen M, Jain, Aklank

Journal:

Molecular Carcinogenesis

Year:

2015

Language:

english

File:

PDF, 2.23 MB

english, 2015

22

Distinct Mechanisms of Nuclease-Directed DNA-Structure-Induced Genetic Instability in Cancer Genomes

Zhao, Junhua, Wang, Guliang, del Mundo, Imee M., McKinney, Jennifer A., Lu, Xiuli, Bacolla, Albino, Boulware, Stephen B., Zhang, Changsheng, Zhang, Haihua, Ren, Pengyu, Freudenreich, Catherine H., Vas

Journal:

Year:

2018

Language:

english

File:

PDF, 2.92 MB

english, 2018

23

Mechanisms of Base Substitution Mutagenesis in Cancer Genomes

Bacolla, Albino, Cooper, David, Vasquez, Karen

Journal:

Year:

2014

Language:

english

File:

PDF, 559 KB

english, 2014

24

RNA Modifications: Reversal Mechanisms And Cancer

Thapar, Roopa, Bacolla, Albino, Oyeniran, Clement, Brickner, Joshua, Chinnam, Naga Babu, Mosammaparast, Nima, Tainer, John

Journal:

Year:

2018

Language:

english

File:

PDF, 3.70 MB

english, 2018

25

Genetic Instabilities and Neurological Diseases || Gross Rearrangements Caused by Long Triplet and Other Repeat Sequences

BACOLLA, ALBINO

Year:

2006

Language:

english

File:

PDF, 1.76 MB

english, 2006

26

A recurrent 8 bp frameshifting indel in FOXF1 defines a novel mutation hotspot associated with alveolar capillary dysplasia with misalignment of pulmonary veins

Karolak, Justyna A., Bacolla, Albino, Liu, Qian, Lantz, Patrick E., Petty, John, Trapane, Pamela, Panzer, Karin, Totapally, Balagangadhar R., Niu, Zhiyv, Xiao, Rui, Xie, Nina G., Wu, Lucia R., Szafran

Journal:

American Journal of Medical Genetics Part A

Year:

2019

Language:

english

File:

PDF, 1.02 MB

english, 2019

27

DNA damage response mechanisms and structures fundamental to cancer research progress

Bacolla, Albino, Tainer, John A.

Journal:

Progress in Biophysics and Molecular Biology

Year:

2019

Language:

english

File:

PDF, 174 KB

english, 2019

28

Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death

Houl, Jerry H., Ye, Zu, Brosey, Chris A., Balapiti-Modarage, Lakshitha P. F., Namjoshi, Sarita, Bacolla, Albino, Laverty, Daniel, Walker, Brian L., Pourfarjam, Yasin, Warden, Leslie S., Babu Chinnam,

Journal:

Nature Communications

Year:

2019

File:

PDF, 4.52 MB

2019

29

ReplicationâBased Rearrangements Are a Common Mechanism for SNCA Duplication in Parkinson's Disease

Seo, Soo Hyun, Bacolla, Albino, Yoo, Dallah, Koo, Yoon Jung, Cho, Sung Im, Kim, Man Jin, Seong, MoonâWoo, Kim, HanâJoon, Kim, JongâMin, Tainer, John A., Park, Sung Sup, Kim, Ji Yeon, Jeon, Beoms

Journal:

Movement Disorders

Year:

2020

File:

PDF, 1.35 MB

2020

30

Histone acetyl transferase MOF orchestrates outcomes at the crossroad of oncogenesis, DNA damage response, proliferation, and stem cell development

Singh, Mayank, Bacolla, Albino, Chaudhary, Shilpi, Hunt, Clayton R, Pandita, Shruti, Chauhan, Ravi, Gupta, Ashna, Tainer, John A, Pandita, Tej K

Journal:

Molecular and Cellular Biology

Year:

2020

File:

PDF, 1.61 MB

2020

31

XRCC1 promotes replication restart, nascent fork degradation and mutagenic DNA repair in BRCA2-deficient cells

Eckelmann, Bradley J, Bacolla, Albino, Wang, Haibo, Ye, Zu, Guerrero, Erika N, Jiang, Wei, El-Zein, Randa, Hegde, Muralidhar L, Tomkinson, Alan E, Tainer, JohnÂ A, Mitra, Sankar

Journal:

Year:

2020

File:

PDF, 4.59 MB

2020